Photo by DeepMind on Unsplash

Nanopore Reference Human Genome Dataset for Machine Learning

Install DagsHub:

pip install dagshub
Click on copy button to copy content

To stream this data directly on DagsHub

from dagshub.streaming import DagsHubFilesystem

fs = DagsHubFilesystem(".", repo_url="https://test.dagshub.com/DagsHub-Datasets/nanopore-dataset")

fs.listdir("s3://nanopore-human-wgs")
Click on copy button to copy content

Description

This dataset includes the sequencing and assembly of a reference standard human genome (GM12878) using the MinION nanopore sequencing instrument with the R9.4 1D chemistry.

Additional information

Update frequency

Data will be added as methodology improves or new data uses are encountered.

Managed by

Nanopore Whole Genome Sequencing Consortium

License

Nanopore Human Reference data is released under the Creative Commons CC-BY license and allows free, full and open access to all. For more details please refer to the data reuse and license section of the documentation.

Related datasets

Allen Brain Observatory – Visual Coding AWS Public Data Set

Allen Cell Imaging Collections

Biological and Physical Sciences (BPS) Microscopy Benchmark Training Dataset

Cancer Cell Line Encyclopedia (CCLE)

Launch your ML development to new heights with DagsHub

Back to top